DNA transcribe RNA translate α-helix β-sheet PROTEIN Genotype → Proteotype
Precision Molecular Science

The language of
genes made visible

DNA RNA Protein

We decode the complete molecular chain from genotype to proteotype — mapping how every genetic variant shapes protein structure, modifications, interactions, and function.

Explore the Proteome Our Vision
80% Disease Variants Unexplained
20K+ Human Protein Genes
~1M Protein Variants Per Person
400+ PTM Types Discovered
Therapeutic Potential

The genome promised everything.
It delivered half.

For decades, we sequenced genomes and measured transcripts, believing RNA would tell us everything about cellular function. It doesn't. Post-transcriptional regulation, translational control, and post-translational modifications create a proteome orders of magnitude more complex than the genome.

Proteins are the true molecular machines of life — the workhorses that execute virtually every function in every cell, from catalysis to signalling to structural integrity.

Genoproteomics bridges this gap. We systematically map how every genetic variant shapes the proteome — its structure, modifications, interactions, and dynamics — at molecular resolution.

Not predictions. Direct, measurable, actionable protein phenotypes.

Step 01 — Genome
Genetic Variation
SNPs, indels, copy-number variants, and structural rearrangements encoded in the 3-billion-base human genome.
Step 02 — Transcriptome
RNA Regulation
Splicing isoforms, RNA stability, m6A modifications, and translational efficiency shape what actually gets made.
Step 03 — Proteome
Protein Reality
The functional endpoint: folded structures, PTMs, complexes, subcellular localisation, and turnover rates that determine cell fate.

Life's molecular machines

Proteins execute virtually every function necessary for life. Their remarkable structural diversity enables thousands of distinct biochemical roles.

⚗️
Enzymatic Catalysis
Enzymes accelerate chemical reactions by factors of millions to billions, enabling reactions that would otherwise take geological timescales to complete in milliseconds.
Kinases Proteases Polymerases
📡
Signal Transduction
Signalling proteins transmit information from cell surface to nucleus with remarkable fidelity, enabling coordinated responses to hormones, growth factors, and stress.
Receptors G-Proteins Kinase Cascades
🏛️
Structural Architecture
Structural proteins provide the mechanical skeleton of cells and tissues, forming the cytoskeleton, ECM, and specialised structures ranging from collagen fibres to nuclear lamina.
Collagen Keratin Actin/Tubulin
🚚
Molecular Transport
Transport proteins move molecules across membranes and through body fluids with exquisite selectivity, enabling nutrient uptake and oxygen delivery to every tissue.
Hemoglobin Ion Channels ABC Transporters
🛡️
Immune Recognition
Immune proteins recognise and neutralise pathogens with extraordinary specificity. Antibodies provide adaptive recognition while complement proteins coordinate innate responses.
Antibodies Cytokines MHC
🎛️
Gene Regulation
Regulatory proteins control gene expression by binding DNA, RNA, or other proteins, determining which genes are active in each cell type at each moment in development.
TFs Histones Chromatin Remodellers

Three pillars of genoproteomics

Comprehensive approaches to understanding the genotype-to-proteotype relationship across computation, structure, and clinical translation.

🧬
Computational Genoproteomics
Deep learning models and integrative pipelines that predict how genetic variants reshape protein structure, stability, interaction networks, and functional dynamics at scale.
Deep Learning pQTL Mapping Multi-omics
🔬
Structural Genoproteomics
Mapping structural consequences of genetic variation using AlphaFold3, molecular dynamics simulations, cryo-EM, and HDX-MS to capture conformational landscapes.
AlphaFold Cryo-EM MD Simulations
💊
Translational Genoproteomics
Bridging molecular insights to patient benefit — identifying protein biomarkers, druggable targets, and pharmacogenomic determinants of therapeutic response.
Pharmacogenomics Biomarkers Drug Targets

Meet the pioneers

An interdisciplinary collective building the foundations of a new scientific field, from microbiology and data science to biotechnology.

KRR
Kushal Raj Roy
Founder & Principal Investigator
Genoproteomics Initiative · University of Houston
Computational Structural Biology · Protein Dynamics · Single-Molecule FRET · Multi-Omics Integration · MD Simulations
Founder

Join the revolution

We are building a new scientific discipline from the ground up. We need passionate researchers, engineers, and visionaries who believe that understanding protein biology at molecular resolution will transform medicine.

Whether you are a computational biologist, structural biologist, proteomics specialist, or deeply curious newcomer — if you can contribute to mapping the genotype-to-proteotype landscape, we want to hear from you.

  • Be a pioneer — help define the vocabulary and methodology of an emerging field before the textbooks are written.
  • Collaborate globally — connect with researchers at institutions across continents, from Dhaka to Houston to Kuala Lumpur.
  • Open science first — all tools, pipelines, and datasets are freely available to the community.
  • Real impact — our work directly advances precision medicine and therapeutic development.
✦ Apply to Join

The proteome awaits.
Let's decode it together.

Questions? Ideas? Collaborations? We'd love to hear from you.